Page 81 - 53rd Annual Drosophila Research Conference

POSTER SESSIONS See page 16 for presentation schedule
Poster board number is in bold above title. The first author is the presenter. Full abstracts can be found online at drosophila-conf.org
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855C
Microarray-based Capture of Novel Expressed Cell type-specific
Transcripts (CoNECT) to annotate tissue-specific transcript isoforms.
Xiaojing Hong1, Harshavardhan Doddapaneni 2, Matthew Rodesch 3,
Heather Halvensleben3, Raghu Metpally 1, Todd Richmond3, Bolei
Fu1 , Thomas Albert3, J. Robert Manak1,2,4 . 1) Dept of Biology, Univ
of Iowa, Iowa City, IA; 2) Carver Center for Genomics, Univ of Iowa,
Iowa City, IA; 3) Roche NimbleGen, Madison, WI; 4) Dept of
Pediatrics, Univ of Iowa, Iowa City, IA.
856A
Developing a quantitative, cellular resolution morphology and gene
expression atlas for Drosophila embryogenesis: A digital 'Campos-
Ortega and Hartenstein’. Soile V. E. Keränen1 , Jonathan T. Barron2,
Pablo Arbelaez2 , Jitendra Malik2, Mark D. Biggin1 , David W.
Knowles1 . 1) Lawrence Berkeley Natl Lab, Berkeley, CA; 2) Electrical
Engineering and Computer Science, UC Berkeley, Berkeley, CA.
857B
Efficient phenotypic analysis using unfixed, uncoated adult Drosophila
for scanning electron microscopy. Nicholas J. Tardi, Kevin A.
Edwards. Biological Sciences, Illinois State Univ, Normal, IL.
858C
OpenSPIM - an open hardware project to bring Selective Plane
Illumination Microscopy to the hands of the Drosophila researchers.
Pavel Tomancak, Peter Pitrone, Johannes Schindelin. MPI-CBG,
Dresden, Germany.
859A
Morphogen gradients quantified by sub-single embryo RNA-seq. Peter
A. Combs1, Michael B. Eisen2,3. 1) Biophysics Grad Group, UC
Berkeley, Berkeley, CA; 2) Department of Molecular and Cell Biology,
Univ California, Berkeley, CA; 3) Howard Hughes Medical Institute,
Univ California, Berkeley, CA.
860B
New Tool in the lab: a Robotic System to process Drosophila samples.
Joana Branco1 , António Lopes1, João Salgado 1, Rui Cortesão2 , Jorge
Batista2 , Nuno André Faustino1. 1) Gene PreDiT, SA Núcleo 4 - Lote
4-A, Ed. Biocant II 3060-119 Cantanhede Portugal; 2) Institute of
Systems and Robotics Electrical and Computer Engineering Department,
University of Coimbra 3030-290 Coimbra Portugal.
861C
Accessing fly data from the modENCODE project: modMine, GBrowse
and dataset search. Sergio Contrino1 , Daniela Butano1, Seth Carbon2 ,
Adrian Carr1 , Fengyuan Hu1 , Ellen Kephart2 , Paul Lloyd2, Rachel
Lyne1 , Marc Perry3 , Peter Ruzanov3, Richard Smith 1, E. O. Stinson2 ,
Radek Stepan1, Julie Sullivan 1, Alex Kalderimis1, Zheng Zha 3,
Suzanna Lewis2 , Gos Micklem1 , Lincoln Stein3 . 1) Department of
Genetics, University of Cambridge, Cambridge, UK; 2) Lawrence
Berkeley National Laboratory; Genomics Division, Berkeley, CA, USA;
3) Ontario Institute for Cancer Research, Toronto, ON, Canada.
862A
Organically Modified Silica nanoparticles are biocompatible and can be
targeted to Drosophila neurons in vivo. Shermali Gunawardena1,2 ,
Farda Barandeh1, Phuong-Lan Nguyen1 , Rajiv Kumar1 , Gary
Iacobucci1, Michelle L. Kuznicki1 , Andrew Kosterman1 , Earl J.
Bergey2 , Paras N. Prasad2, Shermali Gunawardena1,2 . 1) Biological
Sciences, SUNY at Buffalo, Buffalo, NY; 2) 2Institute of Laser,
Photonics and Biophotonics, The State University of New York at
Buffalo, Buffalo, NY, 14260.
863B
pΔTubHA4C: a new versatile vector for constitutive expression in
Drosophila. Barbara Perez1,2,4, Stephanie Arcia1,3,4, Yan Zhang 4,
Pedro Fernandez-Funez4 , Diego Rincon-Limas4. 1) Undergraduate
Dept of Microbiology; 2) McNair Scholar; 3) HHMI/Science for Life
Program; 4) Dept of Neurology, University of Florida, Gainesville, FL.
864C
The FlyMine Project: New Developments and Interoperation. Julie
Sullivan, Daniela Butano, Adrian Carr, Sergio Contrino, Hu
Fengyuen, Alex Kalderimis, Rachel Lyne, Mike Lyne, Richard
Smith, Radek Stêpán, Gos Micklem. Genetics Dept, University of
Cambridge, Cambridge, UK.
865A
The TRiP: The Transgenic RNAi Project at Harvard Medical School. D.
Yang-Zhou1 , L. Holderbaum1 , J. Ni1,4, L. Liu 1,4, S. Kondo1,5 , R. Tao1,
L. Jiang1 , Y. Hu1, R. Sopko 1, A. Miller1 , S. Randklev1, M. Foos1 , S.
Ball1, B. McElvany 1, I. Flockhart1 , S. Mohr1, N. Perrimon1,2, L.
Perkins1,3. 1) Dept. of Genetics, HMS, Boston, MA; 2) HHMI; 3)
MGH, Boston, MA; 4) Tsinghua, China; 5) DGRC, Japan.
866B
Metabolomic characterization of Sod1 null flies using Liquid
Chromatography/Mass Spectrometry. Jose M. Knee, Thomas J. S.
Merritt. Department of Chemistry and Biochemistry, Laurentian
University, Sudbury, Ontario, Canada.
Systems and quantitative biology
867C
Causes and Consequences of Genetic Background effects: Re-
integrating genetic background into mutational analysis. Ian M.
Dworkin. Dept Zoology, Michigan State Univ, East Lansing, MI.
868A
Different Patterns of H3K27me3 in Four Drosophila Species Revealed
Through ChIP-seq. Robert Arthur 1,2, Matthew Slattery2, Rebecca
Spokony2, Jennifer Zebia2 , Lijia Ma2, Xiaochun Ni1,2, Sarah Suchy 2,
Nicolas Negre2 , Joelle Perusse2, Ilya Ruvinsky1,2, Kevin White1,2 . 1)
Ecology and Evolution, University of Chicago, Chicago, IL; 2) Institute
for Genomics and Systems Biology, University of Chicago, Chicago, IL.
869B
Correlating gene expression patterns with gene, protein, and RNA
interaction networks in Drosophila. Thilakam Murali, Russell Finley.
Ctr Molecular Medicine and Genetics, Wayne State Univ Med School,
Detroit, MI.
870C
Prediction of Orthologous Gene Function: Experimental Verification of
ID Test Results. Anna James1, Sudhindra R. Gadagkar1 , Ellen D.
Tarr2 , Gerald B. Call3 . 1) Department of Biomedical Sciences, College
of Health Sciences, Midwestern University, Glendale, AZ; 2)
Department of Microbiology & Immunology, Arizona College of
Osteopathic Medicine, Midwestern University, Glendale, AZ; 3)
Department of Pharmacology, Arizona College of Osteopathic
Medicine, Midwestern University, Glendale, AZ.
871A
Vibration-sensing circuitry of Drosophila larva with synaptic resolution.
Albert Cardona1,2 , Casey Schneider-Mizell2 . 1) HHMI Janelia Farm,
Ashburn, VA; 2) Institute of Neuroinformatics, University of Zurich and
ETH Zurich, Switzerland.
872B
The Rabome of Drosophila melanogaster. Sebastian Dunst, Marko
Brankatschk, Andreas Sagner, Beate Brankatschk, Marie Hannusa,
Tom Kazimiers, Pavel Tomancak, Suzanne Eaton. MPI-CBG,
Dresden, Germany.
873C
Knockdown of bicoid interrogates models for combinatorial control of
gene expression. Max V. Staller, Zeba Wunderlich, Meghan D.
Bragdon, Kelly B. Eckenrode. Dept Systems Biology, Harvard
Medical School, Boston, MA.